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Number of items at this level (without sub-levels): 140.

2021

Born, Johannes ; Weitzel, Kerstin ; Suess, Beatrix ; Pfeifer, Felicitas (2021):
A Synthetic Riboswitch to Regulate Haloarchaeal Gene Expression.
In: Frontiers in microbiology, 12, p. 696181. ISSN 1664-302X,
DOI: 10.3389/fmicb.2021.696181,
[Article]

Kaiser, Christoph ; Schneider, Jeannine ; Groher, Florian ; Suess, Beatrix ; Wachtveitl, Josef (2021):
What defines a synthetic riboswitch? - Conformational dynamics of ciprofloxacin aptamers with similar binding affinities but varying regulatory potentials.
In: Nucleic acids research, 49 (7), pp. 3661-3671. ISSN 1362-4962,
DOI: 10.1093/nar/gkab166,
[Article]

Schwich, Oliver Daniel ; Blümel, Nicole ; Keller, Mario ; Wegener, Marius ; Setty, Samarth Thonta ; Brunstein, Melinda Elaine ; Poser, Ina ; Mozos, Igor Ruiz De Los ; Suess, Beatrix ; Münch, Christian ; McNicoll, François ; Zarnack, Kathi ; Müller-McNicoll, Michaela (2021):
SRSF3 and SRSF7 modulate 3'UTR length through suppression or activation of proximal polyadenylation sites and regulation of CFIm levels.
In: Genome biology, 22 (1), p. 82. ISSN 1474-760X,
DOI: 10.1186/s13059-021-02298-y,
[Article]

Kläsener, Kathrin ; Jellusova, Julia ; Andrieux, Geoffroy ; Salzer, Ulrich ; Böhler, Chiara ; Steiner, Sebastian N. ; Albinus, Jonas B. ; Cavallari, Marco ; Suess, Beatrix ; Voll, Reinhard E. ; Boerries, Melanie ; Wollscheid, Bernd ; Reth, Michael (2021):
CD20 as a gatekeeper of the resting state of human B cells.
In: Proceedings of the National Academy of Sciences of the United States of America, 118 (7), pp. e2021342118. ISSN 1091-6490,
DOI: 10.1073/pnas.2021342118,
[Article]

Mol, Adam ; Vogel, Marc ; Suess, Beatrix (2021):
Inducible nuclear import by TetR aptamer-controlled 3' splice site selection.
In: RNA (New York, N.Y.), 27 (2), pp. 234-241. ISSN 1469-9001,
DOI: 10.1261/rna.077453.120,
[Article]

Huhn, Meik (2021):
Tryptophan-Metabolismus bei chronisch-entzündlichen Darmerkrankungen : Biomarker für Inflammation und Karzinogenese. (Publisher's Version)
Darmstadt, Technische Universität Darmstadt,
DOI: 10.12921/tuprints-00017215,
[Ph.D. Thesis]

Schneider, Jeannine (2021):
Goldnanopartikel-basierte Aptasensoren zum Nachweis von Antibiotika. (Publisher's Version)
Darmstadt, Technische Universität,
DOI: 10.26083/tuprints-00017509,
[Ph.D. Thesis]

Hedrich, Stella Andrea (2021):
Transcriptional and posttranscriptional regulation of the microRNA pathway by 5-lipoxygenase. (Publisher's Version)
Darmstadt, Technische Universität,
DOI: 10.26083/tuprints-00009097,
[Ph.D. Thesis]

Engel, Franziska Marianne (2021):
Die Rolle der kleinen RNA scr5239 in Streptomyces coelicolor. (Publisher's Version)
Darmstadt, Technische Universität,
DOI: 10.26083/tuprints-00017527,
[Ph.D. Thesis]

Groher, Ann-Christin (2021):
Optimierung und Analyse von synthetischen Tetrazyklin-Tandem-Riboswitchen durch machine learning. (Publisher's Version)
Darmstadt, Technische Universität,
DOI: 10.26083/tuprints-00017891,
[Ph.D. Thesis]

Niesel, Katja Anne (2021):
The influence of radio-immunotherapy on the tumor microenvironment of breast-to-brain metastasis and the investigation of novel adjuvant therapies. (Publisher's Version)
Darmstadt, Technische Universität,
DOI: 10.26083/tuprints-00018577,
[Ph.D. Thesis]

2020

Uebbing, Stella ; Kreiß, Marius ; Scholl, Friederike ; Häfner, Ann-Kathrin ; Sürün, Duran ; Garscha, Ulrike ; Werz, Oliver ; Basavarajappa, Devaraj ; Samuelsson, Bengt ; Rådmark, Olof ; Suess, Beatrix ; Steinhilber, Dieter (2020):
Modulation of microRNA processing by 5-lipoxygenase.
In: FASEB journal : official publication of the Federation of American Societies for Experimental Biology, ISSN 1530-6860,
DOI: 10.1096/fj.202002108R,
[Article]

Schmidt, Michael ; Hamacher, Kay ; Reinhardt, Felix ; Lotz, Thea S. ; Groher, Florian ; Suess, Beatrix ; Jager, Sven (2020):
SICOR: Subgraph Isomorphism Comparison of RNA Secondary Structures.
In: IEEE/ACM Transactions on Computational Biology and Bioinformatics, 17 (6), pp. 2189-2195. ISSN 1545-5963,
DOI: 10.1109/TCBB.2019.2926711,
[Article]

Urbanowitz, Ann-Kathrin (2020):
Potential hyperaktiver Gerinnungsfaktor IX Varianten für den Einsatz in der Hämophilie B Therapie. (Publisher's Version)
Darmstadt, Technische Universität,
DOI: 10.25534/tuprints-00014421,
[Ph.D. Thesis]

Patasic, Lea (2020):
DARPin-targeted Chimeric Antigen Receptor T cells: CD4 as a cellular target shows potential to evade HIV latency reservoir.
Darmstadt, Technische Universität,
DOI: 10.25534/tuprints-00013332,
[Ph.D. Thesis]

Eresch, Jeanette (2020):
Die Rolle der Sphingosinkinase 2 in der Pathogenese gefäßproliferativer Netzhauterkrankungen.
Darmstadt, Technische Universität,
DOI: 10.25534/tuprints-00012225,
[Ph.D. Thesis]

Suess, Beatrix ; Hermann, Thomas (2020):
Editorial Overview: Nanobiotechnology.
In: Current opinion in biotechnology, 63, pp. iii-v. ISSN 1879-0429,
DOI: 10.1016/j.copbio.2020.05.007,
[Article]

Basavarajappa, Devaraj ; Uebbing, Stella ; Kreiss, Marius ; Lukic, Ana ; Suess, Beatrix ; Steinhilber, Dieter ; Samuelsson, Bengt ; Rådmark, Olof (2020):
Dicer up-regulation by inhibition of specific proteolysis in differentiating monocytic cells.
In: Proceedings of the National Academy of Sciences of the United States of America, 117 (15), pp. 8573-8583. ISSN 1091-6490,
DOI: 10.1073/pnas.1916249117,
[Article]

Grau, Florian C. ; Jaeger, Jeannine ; Groher, Florian ; Suess, Beatrix ; Muller, Yves A. (2020):
The complex formed between a synthetic RNA aptamer and the transcription repressor TetR is a structural and functional twin of the operator DNA-TetR regulator complex.
In: Nucleic acids research, 48 (6), pp. 3366-3378. ISSN 1362-4962,
DOI: 10.1093/nar/gkaa083,
[Article]

Engel, Franziska ; Ossipova, Elena ; Jakobsson, Per-Johan ; Vockenhuber, Michael-Paul ; Suess, Beatrix (2020):
sRNA scr5239 Involved in Feedback Loop Regulation of Streptomyces coelicolor Central Metabolism.
In: Frontiers in Microbiology, 10, p. 3121. ISSN 1664-302X,
DOI: 10.3389/fmicb.2019.03121,
[Article]

Borch, Alexandra (2020):
Identification of novel cellular factors involved in HIV-1 latency.
Darmstadt, Technische Universität,
DOI: 10.25534/tuprints-00011289,
[Ph.D. Thesis]

Emmerich, Anne C. ; Wellstein, Julia ; Ossipova, Elena ; Baumann, Isabell ; Lengqvist, Johan ; Kultima, Kim ; Jakobsson, Per-Johan ; Steinhilber, Dieter ; Saul, Meike J. (2020):
Proteomics-Based Characterization of miR-574-5p Decoy to CUGBP1 Suggests Specificity for mPGES-1 Regulation in Human Lung Cancer Cells.
In: Frontiers in Pharmacology, 11, Frontiers, ISSN 1663-9812,
DOI: 10.25534/tuprints-00011599,
[Article]

Cullmann, Katharina (2020):
Doxycycline-inducible viral vector systems for selective overexpression of supportive factors to enhance in vitro megakaryocyte and platelet production.
Darmstadt, Technische Universität,
DOI: 10.25534/tuprints-00011722,
[Ph.D. Thesis]

Zahn, Tobias (2020):
Entwicklung eines neuartigen Ansatzes zur therapeutischen Vakzinierung chronischer HBV-Infektionen.
Darmstadt, Technische Universität,
DOI: 10.25534/tuprints-00011886,
[Ph.D. Thesis]

Häcker, Aline (2020):
Immunzytokine zur Steigerung der antitumoralen Aktivität von CAR-modifizierten Lymphozyten.
Darmstadt, Technische Universität,
DOI: 10.25534/tuprints-00011550,
[Ph.D. Thesis]

Mol, Adam Artur (2020):
TetR-binding aptamer as a versatile regulatory element. (Publisher's Version)
Darmstadt, Technische Universität,
DOI: 10.25534/tuprints-00011845,
[Ph.D. Thesis]

2019

Mol, Adam A. ; Groher, Florian ; Schreiber, Britta ; Rühmkorff, Ciaran ; Suess, Beatrix (2019):
Robust gene expression control in human cells with a novel universal TetR aptamer splicing module.
In: Nucleic acids research, 47 (20), pp. e132. ISSN 1362-4962,
DOI: 10.1093/nar/gkz753,
[Article]

Lehr, François-Xavier ; Hanst, Maleen ; Vogel, Marc ; Kremer, Jennifer ; Göringer, H. Ulrich ; Suess, Beatrix ; Koeppl, Heinz (2019):
Cell-free prototyping of AND-logic gates based on heterogeneous RNA activators.
In: ACS Synthetic Biology, 8 (9), pp. 2163-2173. ACS Publications, ISSN 2161-5063,
DOI: 10.1021/acssynbio.9b00238,
[Article]

Daube, Diane ; Vogel, Marc ; Suess, Beatrix ; Corzilius, Björn (2019):
Dynamic nuclear polarization on a hybridized hammerhead ribozyme: An explorative study of RNA folding and direct DNP with a paramagnetic metal ion cofactor.
In: Solid state nuclear magnetic resonance, 101, pp. 21-30. ISSN 1527-3326,
DOI: 10.1016/j.ssnmr.2019.04.005,
[Article]

Saul, Meike J. ; Emmerich, Anne C. ; Steinhilber, Dieter ; Suess, Beatrix (2019):
Regulation of Eicosanoid Pathways by MicroRNAs.
In: Frontiers in pharmacology, 10, p. 824. ISSN 1663-9812,
DOI: 10.3389/fphar.2019.00824,
[Article]

Saul, Meike J. ; Baumann, Isabell ; Bruno, Annalisa ; Emmerich, Anne C. ; Wellstein, Julia ; Ottinger, Sarah M. ; Contursi, Annalisa ; Dovizio, Melania ; Donnini, Sandra ; Tacconelli, Stefania ; Raouf, Joan ; Idborg, Helena ; Stein, Stefan ; Korotkova, Marina ; Savai, Rajkumar ; Terzuoli, Erika ; Sala, Gianluca ; Seeger, Werner ; Jakobsson, Per-Johan ; Patrignani, Paola ; Suess, Beatrix ; Steinhilber, Dieter (2019):
miR-574-5p as RNA decoy for CUGBP1 stimulates human lung tumor growth by mPGES-1 induction.
In: FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 33 (6), pp. 6933-6947. ISSN 1530-6860,
DOI: 10.1096/fj.201802547R,
[Article]

Boussebayle, Adrien ; Torka, Daniel ; Ollivaud, Sandra ; Braun, Johannes ; Bofill-Bosch, Cristina ; Dombrowski, Max ; Groher, Florian ; Hamacher, Kay ; Suess, Beatrix (2019):
Next-level riboswitch development-implementation of Capture-SELEX facilitates identification of a new synthetic riboswitch.
In: Nucleic acids research, 47 (9), pp. 4883-4895. ISSN 1362-4962,
DOI: 10.1093/nar/gkz216,
[Article]

Boussebayle, Adrien ; Groher, Florian ; Suess, Beatrix (2019):
RNA-based Capture-SELEX for the selection of small molecule-binding aptamers.
In: Methods (San Diego, Calif.), 161, pp. 10-15. ISSN 1095-9130,
DOI: 10.1016/j.ymeth.2019.04.004,
[Article]

Hetzke, Thilo ; Bowen, Alice M. ; Vogel, Marc ; Gauger, Maximilian ; Suess, Beatrix ; Prisner, Thomas F. (2019):
Binding of tetracycline to its aptamer determined by 2D-correlated Mn2+ hyperfine spectroscopy.
In: Journal of magnetic resonance (San Diego, Calif. : 1997), 303, pp. 105-114. ISSN 1096-0856,
DOI: 10.1016/j.jmr.2019.04.011,
[Article]

Aladin, Victoria ; Vogel, Marc ; Binder, Robert ; Burghardt, Irene ; Suess, Beatrix ; Corzilius, Björn (2019):
Complex formation of the tetracycline-binding aptamer investigated by specific cross-relaxation under DNP.
In: Angewandte Chemie (International ed. in English), 58 (15), pp. 4863-4868. ISSN 1521-3773,
DOI: 10.1002/anie.201811941,
[Article]

Lotz, Thea S. ; Halbritter, Thomas ; Kaiser, Christoph ; Rudolph, Martin M. ; Kraus, Leon ; Groher, Florian ; Steinwand, Sabrina ; Wachtveitl, Josef ; Heckel, Alexander ; Suess, Beatrix (2019):
A light-responsive RNA aptamer for an azobenzene derivative.
In: Nucleic acids research, 47 (4), pp. 2029-2040. ISSN 1362-4962,
DOI: 10.1093/nar/gky1225,
[Article]

Ohuchi, Shoji ; Mascher, Thorsten ; Suess, Beatrix (2019):
Promoter RNA sequencing (PRSeq) for the massive and quantitative promoter analysis in vitro.
In: Scientific reports, 9 (1), p. 3118. ISSN 2045-2322,
DOI: 10.1038/s41598-019-39892-x,
[Article]

Jaeger, Jeannine ; Groher, Florian ; Stamm, Jacqueline ; Spiehl, Dieter ; Braun, Johannes ; Dörsam, Edgar ; Suess, Beatrix (2019):
Characterization and Inkjet Printing of an RNA Aptamer for Paper-Based Biosensing of Ciprofloxacin.
In: Biosensors, 9 (1), pp. E7. ISSN 2079-6374,
DOI: 10.3390/bios9010007,
[Article]

Groher, Ann-Christin ; Jager, Sven ; Schneider, Christopher ; Groher, Florian ; Hamacher, Kay ; Suess, Beatrix (2019):
Tuning the Performance of Synthetic Riboswitches using Machine Learning.
In: ACS Synthetic Biology, 8 (1), pp. 34-44. ISSN 2161-5063,
DOI: 10.1021/acssynbio.8b00207,
[Article]

Hetzke, Thilo ; Vogel, Marc ; Gophane, Dnyaneshwar B. ; Weigand, Julia E. ; Suess, Beatrix ; Sigurdsson, Snorri Th. ; Prisner, Thomas F. (2019):
Influence of Mg2+ on the conformational flexibility of a tetracycline aptamer.
In: RNA (New York, N.Y.), 25 (1), pp. 158-167. ISSN 1469-9001,
DOI: 10.1261/rna.068684.118,
[Article]

Eichenberger, Michael (2019):
Biosynthesis of plant polyketides in yeast.
Darmstadt, Technische Universität,
[Ph.D. Thesis]

Saul, Meike J. ; Hegewald, Anett B. ; Emmerich, Anne C. ; Ossipova, Elena ; Vogel, Marc ; Baumann, Isabell ; Kultima, Kim ; Lengqivst, Johan ; Steinhilber, Dieter ; Jakobsson, Per Johan (2019):
Mass Spectrometry-Based Proteomics Approach Characterizes the Dual Functionality of miR-328 in Monocytes.
In: Frontiers in Pharmacology, 10, Frontiers, ISSN 1663-9812,
DOI: 10.3389/fphar.2019.00640,
[Article]

Stamm, Jacqueline ; Spiehl, Dieter ; Jaeger, Jeannine ; Groher, Florian ; Meckel, Tobias ; Suess, Beatrix ; Dörsam, Edgar (2019):
A test system for the printing of functional nucleic acids onto different carriers and verification of its functionality by DNA dyes.
In: Journal of Print and Media Technology Research, 8 (1), pp. 7-17. Iarigai, ISSN 2414-6250,
DOI: 10.14622/JPMTR-1821,
[Article]

Braun, Johannes (2019):
Identification of regulatory RNA elements based on structural conservation.
Darmstadt, Technische Universität,
[Ph.D. Thesis]

Saul, Meike J. ; Emmerich, Anne C. ; Steinhilber, Dieter ; Suess, Beatrix (2019):
Regulation of Eicosanoid Pathways by MicroRNAs.
In: Frontiers in Pharmacology, 10, Frontiers, ISSN 1663-9812,
DOI: 10.3389/fphar.2019.00824,
[Article]

2018

Boussebayle, Adrien (2018):
Development of RNA aptamers and synthetic riboswitch using Capture-SELEX.
Darmstadt, Technische Universität,
[Ph.D. Thesis]

Lotz, Thea S. ; Suess, Beatrix (2018):
Small-Molecule-Binding Riboswitches.
In: Microbiology spectrum, 6 (4), ISSN 2165-0497,
[Article]

Vogel, Marc ; Weigand, Julia E. ; Kluge, Britta ; Grez, Manuel ; Suess, Beatrix (2018):
A small, portable RNA device for the control of exon skipping in mammalian cells.
In: Nucleic acids research, 46 (8), pp. 10.1093/nar/gky062. ISSN 1362-4962,
[Article]

Ohuchi, Shoji ; Suess, Beatrix (2018):
Altered stoichiometry of an evolved RNA aptamer.
In: RNA (New York, N.Y.), 24 (4), pp. 480-485. ISSN 1469-9001,
[Article]

Groher, Florian ; Bofill-Bosch, Cristina ; Schneider, Christopher ; Braun, Johannes ; Jager, Sven ; Geißler, Katharina ; Hamacher, Kay ; Suess, Beatrix (2018):
Riboswitching with ciprofloxacin-development and characterization of a novel RNA regulator.
In: Nucleic acids research, 46 (4), pp. 2121-2132. ISSN 1362-4962,
[Article]

Lotz, Thea Sabrina (2018):
Development of photo-responsive synthetic RNA devices.
Darmstadt, Technische Universität,
[Ph.D. Thesis]

2017

Atanasov, Janina ; Groher, Florian ; Weigand, Julia E. ; Suess, Beatrix (2017):
Design and implementation of a synthetic pre-miR switch for controlling miRNA biogenesis in mammals.
In: Nucleic acids research, 45 (22), pp. e181. ISSN 1362-4962,
DOI: 10.1093/nar/gkx858,
[Article]

Saul, Meike J. ; Groher, Florian ; Hegewald, Anett B. ; Müller-McNicoll, Michaela ; Marschalek, Rolf ; Suess, Beatrix ; Steinhilber, Dieter (2017):
TGFβ/SMAD signalling modulates MLL and MLL-AF4 mediated 5-lipoxygenase promoter activation.
In: Prostaglandins & other lipid mediators, 133, pp. 60-67. ISSN 1098-8823,
[Article]

Steinert, Hannah ; Sochor, Florian ; Wacker, Anna ; Buck, Janina ; Helmling, Christina ; Hiller, Fabian ; Keyhani, Sara ; Noeske, Jonas ; Grimm, Steffen Kaspar ; Rudolph, Martin M. ; Keller, Heiko ; Mooney, Rachel Anne ; Landick, Robert ; Suess, Beatrix ; Fürtig, Boris ; Wöhnert, Jens ; Schwalbe, Harald (2017):
Pausing guides RNA folding to populate transiently stable RNA structures for riboswitch-based transcription regulation.
In: eLife, 6, pp. e21297. ISSN 2050-084X,
[Article]

Kim, Yong-Boum ; Wacker, Anna ; Laer, Karl von ; Rogov, Vladimir V. ; Suess, Beatrix ; Schwalbe, Harald (2017):
Ligand binding to 2'-deoxyguanosine sensing riboswitch in metabolic context.
In: Nucleic acids research, 45 (9), pp. 5375-5386. ISSN 1362-4962,
[Article]

Ohuchi, Shoji ; Suess, Beatrix (2017):
An inhibitory RNA aptamer against the lambda cI repressor shows transcriptional activator activity in vivo.
In: FEBS letters, 591 (10), pp. 1429-1436. ISSN 1873-3468,
[Article]

Atanasov, Janina (2017):
Design and implementation of a synthetic pre-miR switch for controlling miRNA biogenesis in mammals.
Darmstadt, Technische Universität,
[Ph.D. Thesis]

Toulmé, Jean-Jacques ; Giangrande, Paloma H. ; Mayer, Günter ; Suess, Beatrix ; Ducongé, Frédéric ; Sullenger, Bruce ; De Franciscis, Vittorio ; Darfeuille, Fabien ; Peyrin, Eric (2017):
Aptamers in Bordeaux, 24-25 June 2016.
In: Pharmaceuticals (Basel, Switzerland), 10 (1), [Article]

Schneider, Christopher (2017):
Design, implementation and characterization of synthetic riboswitches in Saccharomyces cerevisiae.
Darmstadt, Technische Universität Darmstadt,
[Ph.D. Thesis]

Bronstein, L. ; Diemer, J. ; Koeppl, H. ; Schneider, C. ; Suess, Beatrix (2017):
ROC'n'Ribo: Characterizing a riboswitching expression system by modeling single-cell data.
In: ACS Synthetic Biology, (7), pp. 1211-1224. ACS, ISSN 2161-5063,
[Article]

Kemmerer, Katrin (2017):
Alternatives Spleißen unter Hypoxie in humanen Endothelzellen.
Darmstadt, Technische Universität,
[Ph.D. Thesis]

2016

Vogel, Marc (2016):
Kontrolle des prä-mRNA Spleißens durch das Tetrazyklin-Aptamer.
Darmstadt, Technische Universität,
[Ph.D. Thesis]

Vogel, Marc ; Suess, Beatrix (2016):
Label-Free Determination of the Dissociation Constant of Small Molecule-Aptamer Interaction by Isothermal Titration Calorimetry.
In: Methods in molecular biology (Clifton, N.J.), 1380, pp. 113-25. ISSN 1940-6029,
[Article]

Groher, Florian ; Suess, Beatrix (2016):
In vitro selection of antibiotic-binding aptamers.
In: Methods (San Diego, Calif.), 106, pp. 42-50. ISSN 1095-9130,
[Article]

Schneider, Christopher ; Suess, Beatrix (2016):
Identification of RNA aptamers with riboswitching properties.
In: Methods (San Diego, Calif.), 97, pp. 44-50. ISSN 1095-9130,
[Article]

Duchardt-Ferner, Elke ; Gottstein-Schmidtke, Sina R. ; Weigand, Julia E. ; Ohlenschläger, Oliver ; Wurm, Jan-Philip ; Hammann, Christian ; Suess, Beatrix ; Wöhnert, Jens (2016):
What a Difference an OH Makes: Conformational Dynamics as the Basis for the Ligand Specificity of the Neomycin-Sensing Riboswitch.
In: Angewandte Chemie (International ed. in English), 55 (4), pp. 1527-1530. ISSN 1521-3773,
[Article]

Sommer, Morten O. A. ; Suess, Beatrix (2016):
RIBOSWITCHES. (Meta-)genome mining for new ribo-regulators.
In: Science (New York, N.Y.), 352 (6282), pp. 144-5. ISSN 1095-9203,
[Article]

Saul, Meike J. ; Stein, Stefan ; Grez, Manuel ; Jakobsson, Per-Johan ; Steinhilber, Dieter ; Suess, Beatrix (2016):
UPF1 regulates myeloid cell functions and S100A9 expression by the hnRNP E2/miRNA-328 balance.
In: Scientific reports, 6, p. 31995. ISSN 2045-2322,
[Article]

Groher, Florian (2016):
Kontrolle des prä-mRNA Spleißens durch synthetische Riboswitche.
Darmstadt, Technische Universität Darmstadt,
[Ph.D. Thesis]

Rudolph, Michael Martin (2016):
Entwicklung und Anwendung synthetischer RNA-Schalter zur Regulation der Genexpression.
Darmstadt, Technische Universität Darmstadt,
[Ph.D. Thesis]

2015

Gilbert, Bianca (2015):
Charakterisierung der humanen 5 Lipoxygenase als direktes Targetgen des Tumorsuppressors p53 und seine Relevanz für die Tumorgenese.
TU Darmstadt,
[Ph.D. Thesis]

Kolluru, Venkatesh (2015):
Investigating the oncogenic function of FUBP1 in glioblastoma cell lines.
Darmstadt, TU Darmstadt,
[Ph.D. Thesis]

Berens, Christian ; Suess, Beatrix (2015):
Riboswitch engineering - making the all-important second and third steps.
In: Current opinion in biotechnology, 31, pp. 10-15. ISSN 1879-0429,
[Article]

Busch, Saskia ; Auth, Eileen ; Scholl, Friederike ; Huenecke, Sabine ; Koehl, Ulrike ; Suess, Beatrix ; Steinhilber, Dieter (2015):
5-Lipoxygenase Is a Direct Target of miR-19a-3p and miR-125b-5p.
In: Journal of immunology (Baltimore, Md. : 1950), 194 (4), pp. 1646-1653. ISSN 1550-6606,
[Article]

Rudolph, Martin M. ; Vockenhuber, Michael-Paul ; Suess, Beatrix (2015):
Conditional Control of Gene Expression by Synthetic Riboswitches in Streptomyces coelicolor.
In: Methods in enzymology, 550, pp. 283-99. ISSN 1557-7988,
[Article]

Vockenhuber, Michael-Paul ; Heueis, Nona ; Suess, Beatrix (2015):
Identification of metE as a Second Target of the sRNA scr5239 in Streptomyces coelicolor.
In: PloS one, 10 (3), pp. e0120147. ISSN 1932-6203,
[Article]

Berens, Christian ; Groher, Florian ; Suess, Beatrix (2015):
RNA aptamers as genetic control devices: the potential of riboswitches as synthetic elements for regulating gene expression.
In: Biotechnology journal, 10 (2), pp. 246-57. ISSN 1860-7314,
[Article]

Özçoban, Cem ; Halbritter, Thomas ; Steinwand, Sabrina ; Herzig, Lisa-Marie ; Kohl-Landgraf, Jörg ; Askari, Noushin ; Groher, Florian ; Fürtig, Boris ; Richter, Christian ; Schwalbe, Harald ; Suess, Beatrix ; Wachtveitl, Josef ; Heckel, Alexander (2015):
Water-Soluble Py-BIPS Spiropyrans as Photoswitches for Biological Applications.
In: Organic letters, 17 (6), pp. 1517-20. ISSN 1523-7052,
[Article]

Rohde, Jan-H. ; Weigand, Julia E. ; Suess, Beatrix ; Dimmeler, Stefanie (2015):
A Universal Aptamer Chimera for the Delivery of Functional microRNA-126.
In: Nucleic acid therapeutics, 25 (3), pp. 141-51. ISSN 2159-3345,
[Article]

Beilstein, Kim ; Wittmann, Alexander ; Grez, Manuel ; Suess, Beatrix (2015):
Conditional control of Mammalian gene expression by tetracycline-dependent hammerhead ribozymes.
In: ACS synthetic biology, 4 (5), pp. 526-34. ISSN 2161-5063,
[Article]

Wenk, Patricia ; Kaushik, Monu ; Richter, Diane ; Vogel, Marc ; Suess, Beatrix ; Corzilius, Björn (2015):
Dynamic nuclear polarization of nucleic acid with endogenously bound manganese.
In: Journal of biomolecular NMR, 63 (1), pp. 97-109. ISSN 1573-5001,
[Article]

Pedrolli, Danielle Biscaro ; Kühm, Christian ; Sévin, Daniel C. ; Vockenhuber, Michael P. ; Sauer, Uwe ; Suess, Beatrix ; Mack, Matthias (2015):
A dual control mechanism synchronizes riboflavin and sulphur metabolism in Bacillus subtilis.
In: Proceedings of the National Academy of Sciences of the United States of America, 112 (45), pp. 14054-14059. ISSN 1091-6490,
[Article]

2014

Ochs, Meike J. ; Steinhilber, Dieter ; Suess, Beatrix (2014):
MicroRNAs - Novel Therapeutic Targets of Eicosanoid Signalling.
In: Basic & clinical pharmacology & toxicology, 114 (1), pp. 92-96. ISSN 1742-7843,
[Article]

Ochs, Meike J. ; Suess, Beatrix ; Steinhilber, Dieter (2014):
5-Lipoxygenase mRNA and Protein Isoforms.
In: Basic & clinical pharmacology & toxicology, 114 (1), pp. 78-82. ISSN 1742-7843,
[Article]

Heueis, Nona ; Vockenhuber, Michael-Paul ; Suess, Beatrix (2014):
Small non-coding RNAs in streptomycetes.
In: RNA biology, 11 (5), pp. 464-469. ISSN 1555-8584,
[Article]

Groher, Florian ; Suess, Beatrix (2014):
Synthetic riboswitches - A tool comes of age.
In: Biochimica et biophysica acta - Gene regulation mechanisms, 1839 (10), pp. 964-973. ISSN 0006-3002,
[Article]

Gottstein-Schmidtke, Sina R. ; Duchardt-Ferner, Elke ; Groher, Florian ; Weigand, Julia E. ; Gottstein, Daniel ; Suess, Beatrix ; Wöhnert, Jens (2014):
Building a stable RNA U-turn with a protonated cytidine.
In: RNA (New York, N.Y.), 20 (8), pp. 1163-1172. ISSN 1469-9001,
[Article]

Demolli, Shemsi ; Geist, Miriam M. ; Weigand, Julia E. ; Matschiavelli, Nicole ; Suess, Beatrix ; Rother, Michael (2014):
Development of beta-Lactamase as a tool for monitoring conditional gene expression by a tetracycline-riboswitch in methanosarcina acetivorans.
In: Archaea - an international microbiological journal, (Article ID 725610), ISSN 1472-3646,
[Article]

Weigand, Julia E. ; Gottstein-Schmidtke, Sina R. ; Demolli, Shemsi ; Groher, Florian ; Duchardt-Ferner, Elke ; Wöhnert, Jens ; Suess, Beatrix (2014):
Sequence Elements Distal to the Ligand Binding Pocket Modulate the Efficiency of a Synthetic Riboswitch.
In: Chembiochem : a European journal of chemical biology, 15 (11), pp. 1626-1636. ISSN 1439-7633,
[Article]

Reuss, Andreas J. ; Vogel, Marc ; Weigand, Julia E. ; Suess, Beatrix ; Wachtveitl, Josef (2014):
Tetracycline determines the conformation of its aptamer at physiological magnesium concentrations.
In: Biophysical journal, 107 (12), pp. 2953-62. ISSN 1542-0086,
[Article]

2013

Langner, Janina (2013):
Synthetische RNA-Schalter zur Regulation zellulärer Prozesse.
TU Darmstadt,
[Ph.D. Thesis]

Rudolph, Martin Michael ; Vockenhuber, Michael-Paul ; Suess, Beatrix (2013):
Synthetic riboswitches for the conditional control of gene expression in Streptomyces coelicolor.
In: Microbiology (Reading, England), 159, pp. 1416-1422. ISSN 1465-2080,
[Article]

Dovizio, Melania ; Maier, Thorsten J. ; Alberti, Sara ; Di Francesco, Luigia ; Marcantoni, Emanuela ; Münch, Götz ; John, Constance M. ; Suess, Beatrix ; Sgambato, Alessandro ; Steinhilber, Dieter ; Patrignani, Paola (2013):
Pharmacological Inhibition of Platelet-Tumor Cell Cross-Talk Prevents Platelet-Induced Overexpression of Cyclooxygenase-2 in HT29 Human Colon Carcinoma Cells.
In: Molecular pharmacology, 84 (1), pp. 25-40. ISSN 1521-0111,
[Article]

Ochs, Meike J. ; Ossipova, Elena ; Oliynyk, Ganna ; Steinhilber, Dieter ; Suess, Beatrix ; Jakobsson, Per-Johan (2013):
Mass Spectrometry-Based Proteomics Identifies UPF1 as a Critical Gene Expression Regulator in MonoMac 6 Cells.
In: Journal of proteome research, 12 (6), pp. 2622-9. ISSN 1535-3907,
[Article]

Meitert, Johannes ; Aram, Ronny ; Wiesemann, Katharina ; Weigand, Julia E. ; Suess, Beatrix (2013):
Monitoring the expression level of coding and non-coding RNAs using a TetR inducing aptamer tag.
In: Bioorganic & medicinal chemistry, 21 (20), pp. 6233-8. ISSN 1464-3391,
[Article]

Heinrich, Eva-Marie ; Wagner, Jasmin ; Krüger, Marcus ; John, David ; Uchida, Shizuka ; Weigand, Julia E. ; Suess, Beatrix ; Dimmeler, Stefanie (2013):
Regulation of miR-17-92a cluster processing by the microRNA binding protein SND1.
In: FEBS letters, 587 (15), pp. 2405-11. ISSN 1873-3468,
[Article]

2012

Suess, Beatrix ; Entian, Karl-Dieter ; Kötter, Peter ; Weigand, Julia E. (2012):
Aptamer-regulated expression of essential genes in yeast.
In: Methods in molecular biology (Clifton, N.J.), 824, pp. 381-91. ISSN 1940-6029,
[Article]

Weigand, Julia E. ; Wittmann, Alexander ; Suess, Beatrix (2012):
RNA-based networks: using RNA aptamers and ribozymes as synthetic genetic devices.
In: Methods in molecular biology (Clifton, N.J.), 813, pp. 157-68. ISSN 1940-6029,
[Article]

Vockenhuber, Michael-Paul ; Suess, Beatrix (2012):
Streptomyces coelicolor sRNA scr5239 inhibits agarase expression by direct base pairing to the dagA coding region.
In: Microbiology (Reading, England), 158 (Pt 2), pp. 424-35. ISSN 1465-2080,
[Article]

Förster, Ute ; Weigand, Julia E. ; Trojanowski, Peter ; Suess, Beatrix ; Wachtveitl, Josef (2012):
Conformational dynamics of the tetracycline-binding aptamer.
In: Nucleic acids research, 40 (4), pp. 1807-17. ISSN 1362-4962,
[Article]

Ochs, Meike J. ; Sorg, Bernd L. ; Pufahl, Laura ; Grez, Manuel ; Suess, Beatrix ; Steinhilber, Dieter (2012):
Post-transcriptional regulation of 5-lipoxygenase mRNA expression via alternative splicing and nonsense-mediated mRNA decay.
In: PloS one, 7 (2), pp. e31363. ISSN 1932-6203,
[Article]

Wittmann, Alexander ; Suess, Beatrix (2012):
Engineered riboswitches: Expanding researchers' toolbox with synthetic RNA regulators.
In: FEBS letters, 586 (15), pp. 2076-83. ISSN 1873-3468,
[Article]

Langner, Janina S. ; Fuchs, Nina V. ; Hoffmann, Jan ; Wittmann, Alexander ; Brutschy, Bernhard ; Löwer, Roswitha ; Suess, Beatrix (2012):
Biochemical Analysis of the Complex between the Tetrameric Export Adapter Protein Rec of HERV-K/HML-2 and the Responsive RNA Element RcRE pck30.
In: Journal of virology, 86 (17), pp. 9079-87. ISSN 1098-5514,
[Article]

2011

Weigand, Julia E. ; Schmidtke, S. R. ; Will, T. J. ; Duchardt-Ferner, E. ; Hammann, Christian ; Wöhnert, J. ; Suess, Beatrix (2011):
Mechanistic insights into an engineered riboswitch: a switching element which confers riboswitch activity.
In: Nucleic acids research, 39 (8), pp. 3363-3372. ISSN 1362-4962,
[Article]

Hammann, Christian ; Hartmann, Roland K. ; Helm, Mark ; Klostermeier, Dagmar ; Marchfelder, Anita ; Suess, Beatrix ; Vörtler, Stefan (2011):
Regulatory RNAs and beyond.
In: EMBO reports, 12 (8), pp. 751-753. ISSN 1469-3178,
[Article]

Steber, Markus ; Arora, Amit ; Hofmann, Jan ; Brutschy, Bernhard ; Suess, Beatrix (2011):
Mechanistic basis for RNA aptamer-based induction of TetR.
In: Chembiochem : a European journal of chemical biology, 12 (17), pp. 2608-14. ISSN 1439-7633,
[Article]

Ochs, Meike J. ; Steinhilber, Dieter ; Suess, Beatrix (2011):
MicroRNA Involved in Inflammation: Control of Eicosanoid Pathway.
In: Frontiers in pharmacology, 2, p. 39. ISSN 1663-9812,
[Article]

Arora, Amit ; Suess, Beatrix (2011):
An RNA G-quadruplex in the 3' UTR of the proto-oncogene PIM1 represses translation.
In: RNA biology, 8 (5), ISSN 1555-8584,
[Article]

Wittmann, Alexander ; Suess, Beatrix (2011):
Selection of tetracycline inducible self-cleaving ribozymes as synthetic devices for gene regulation in yeast.
In: Molecular bioSystems, 7 (8), pp. 2419-27. ISSN 1742-2051,
[Article]

Vockenhuber, Michael-Paul ; Sharma, Cynthia M. ; Statt, Michaela G. ; Schmidt, Denis ; Xu, Zhenjiang ; Dietrich, Sascha ; Liesegang, Heiko ; Mathews, David H. ; Suess, Beatrix (2011):
Deep sequencing-based identification of small non-coding RNAs in Streptomyces coelicolor.
In: RNA biology, 8 (3), pp. 468-77. ISSN 1555-8584,
[Article]

Wunnicke, Dorith ; Strohbach, Denise ; Weigand, Julia E. ; Appel, Bettina ; Feresin, Emiliano ; Suess, Beatrix ; Müller, Sabine ; Steinhoff, Heinz-Jürgen (2011):
Ligand-induced conformational capture of a synthetic tetracycline riboswitch revealed by pulse EPR.
In: RNA (New York, N.Y.), 17 (1), pp. 182-8. ISSN 1469-9001,
[Article]

2010

Duchardt-Ferner, Elke ; Weigand, Julia E. ; Ohlenschläger, Oliver ; Schmidtke, Sina R. ; Suess, Beatrix ; Wöhnert, Jens (2010):
Highly modular structure and ligand binding by conformational capture in a minimalistic riboswitch.
In: Angewandte Chemie (International ed. in English), 49 (35), pp. 6216-9. ISSN 1521-3773,
[Article]

Suess, Beatrix (2010):
Riboswitches: new aspects of an old story.
In: RNA biology, 7 (1), pp. 65-6. ISSN 1555-8584,
[Article]

Schmidtke, Sina R. ; Duchardt-Ferner, Elke ; Weigand, Julia E. ; Suess, Beatrix ; Wöhnert, Jens (2010):
NMR resonance assignments of an engineered neomycin-sensing riboswitch RNA bound to ribostamycin and tobramycin.
In: Biomolecular NMR assignments, 4 (1), pp. 115-8. ISSN 1874-270X,
[Article]

Krstić, Ivan ; Frolow, Olga ; Sezer, Deniz ; Endeward, Burkhard ; Weigand, Julia E. ; Suess, Beatrix ; Engels, Joachim W. ; Prisner, Thomas F. (2010):
PELDOR spectroscopy reveals preorganization of the neomycin-responsive riboswitch tertiary structure.
In: Journal of the American Chemical Society, 132 (5), pp. 1454-5. ISSN 1520-5126,
[Article]

2009

Weigand, Julia E. ; Suess, Beatrix (2009):
Aptamers and riboswitches: perspectives in biotechnology.
In: Applied microbiology and biotechnology, 85 (2), pp. 229-36. ISSN 1432-0614,
[Article]

Kötter, Peter ; Weigand, Julia E. ; Meyer, Britta ; Entian, Karl-Dieter ; Suess, Beatrix (2009):
A fast and efficient translational control system for conditional expression of yeast genes.
In: Nucleic acids research, 37 (18), pp. e120. ISSN 1362-4962,
[Article]

Suess, Beatrix ; Weigand, Julia E. (2009):
Aptamers as artificial gene regulation elements.
In: Methods in molecular biology (Clifton, N.J.), 535, pp. 201-8. ISSN 1064-3745,
[Article]

Hunsicker, Anke ; Steber, Markus ; Mayer, Günter ; Meitert, Johannes ; Klotzsche, Marcus ; Blind, Michael ; Hillen, Wolfgang ; Berens, Christian ; Suess, Beatrix (2009):
An RNA aptamer that induces transcription.
In: Chemistry & biology, 16 (2), pp. 173-80. ISSN 1879-1301,
[Article]

Hering, Oliver ; Brenneis, Mariam ; Beer, Jürgen ; Suess, Beatrix ; Soppa, Jörg (2009):
A novel mechanism for translation initiation operates in haloarchaea.
In: Molecular microbiology, 71 (6), pp. 1451-63. ISSN 1365-2958,
[Article]

2008

Suess, Beatrix ; Weigand, Julia E. (2008):
Engineered riboswitches: overview, problems and trends.
In: RNA biology, 5 (1), pp. 24-9. ISSN 1555-8584,
[Article]

Weigand, Julia E. ; Sanchez, Martin ; Gunnesch, Ewald-Bernd ; Zeiher, Sabrina ; Schroeder, Renée ; Suess, Beatrix (2008):
Screening for engineered neomycin riboswitches that control translation initiation.
In: RNA (New York, N.Y.), 14 (1), pp. 89-97. ISSN 1469-9001,
[Article]

Suess, Beatrix
Müller, Sabine (ed.) (2008):
Nucleic acids from A to Z : a concise encyclopedia.
Weinheim, Wiley-VCH, ISBN 978-3-527-31211-5,
[Book]

2007

Weigand, Julia E. ; Suess, Beatrix (2007):
Tetracycline aptamer-controlled regulation of pre-mRNA splicing in yeast.
In: Nucleic acids research, 35 (12), pp. 4179-85. ISSN 1362-4962,
[Article]

Weigand, Julia E. ; Suess, Beatrix (2007):
A designed RNA shuts down transcription.
In: Chemistry & biology, 14 (1), pp. 9-11. ISSN 1074-5521,
[Article]

2006

Müller, Michael ; Weigand, Julia E. ; Weichenrieder, Oliver ; Suess, Beatrix (2006):
Thermodynamic characterization of an engineered tetracycline-binding riboswitch.
In: Nucleic acids research, 34 (9), pp. 2607-17. ISSN 1362-4962,
[Article]

Bauer, Gesine ; Suess, Beatrix (2006):
Engineered riboswitches as novel tools in molecular biology.
In: Journal of biotechnology, 124 (1), pp. 4-11. ISSN 0168-1656,
[Article]

Suess, Beatrix (2006):
Trendbericht: RNA-Schalter.
In: Nachrichten aus der Chemie, 54, pp. 273-275. [Article]

Suess, Beatrix (2006):
RNA-Schalter - neuartige Regulatoren der Genexpression.
In: Naturwissenschaftliche Rundschau, (698), pp. 423-428. [Article]

2005

Hanson, Shane ; Bauer, Gesine ; Fink, Barbara ; Suess, Beatrix (2005):
Molecular analysis of a synthetic tetracycline-binding riboswitch.
In: RNA (New York, N.Y.), 11 (4), pp. 503-11. ISSN 1355-8382,
[Article]

Suess, Beatrix (2005):
Engineered riboswitches control gene expression by small molecules.
In: Biochemical Society transactions, 33 (Pt 3), pp. 474-6. ISSN 0300-5127,
[Article]

Berens, Christian ; Suess, Beatrix (2005):
Synthetic riboregulators - an alternative means to control gene expression.
In: Gene therapy and molecular biology, 9, pp. 417-422. [Article]

2004

Suess, Beatrix ; Fink, Barbara ; Berens, Christian ; Stentz, Régis ; Hillen, Wolfgang (2004):
A theophylline responsive riboswitch based on helix slipping controls gene expression in vivo.
In: Nucleic acids research, 32 (4), pp. 1610-4. ISSN 1362-4962,
[Article]

2003

Hanson, Shane ; Berthelot, Karine ; Fink, Barbara ; McCarthy, John E. G. ; Suess, Beatrix (2003):
Tetracycline-aptamer-mediated translational regulation in yeast.
In: Molecular microbiology, 49 (6), pp. 1627-37. ISSN 0950-382X,
[Article]

Suess, Beatrix ; Hanson, Shane ; Berens, Christian ; Fink, Barbara ; Schroeder, Renée ; Hillen, Wolfgang (2003):
Conditional gene expression by controlling translation with tetracycline-binding aptamers.
In: Nucleic acids research, 31 (7), pp. 1853-8. ISSN 1362-4962,
[Article]

Steinhoff, Heinz Jürgen ; Suess, Beatrix (2003):
Molecular mechanisms of gene regulation studied by site-directed spin labeling.
In: Methods (San Diego, Calif.), 29 (2), pp. 188-95. ISSN 1046-2023,
[Article]

2000

Tiebel, Beatrix ; Garke, K. ; Hillen, W. (2000):
Observing conformational and activity changes of tet repressor in vivo.
In: Nature structural biology, 7 (6), pp. 479-81. ISSN 1072-8368,
[Article]

1999

Tiebel, Beatrix ; Radzwill, N. ; Aung-Hilbrich, L. M. ; Helbl, V. ; Steinhoff, H. J. ; Hillen, W. (1999):
Domain motions accompanying Tet repressor induction defined by changes of interspin distances at selectively labeled sites.
In: Journal of molecular biology, 290 (1), pp. 229-40. ISSN 0022-2836,
[Article]

1998

Tiebel, Beatrix ; Aung-Hilbrich, L. M. ; Schnappinger, D. ; Hillen, W. (1998):
Conformational changes necessary for gene regulation by Tet repressor assayed by reversible disulfide bond formation.
In: The EMBO journal, 17 (17), pp. 5112-9. ISSN 0261-4189,
[Article]

Helbl, V. ; Tiebel, Beatrix ; Hillen, W. (1998):
Stepwise selection of TetR variants recognizing tet operator 6C with high affinity and specificity.
In: Journal of molecular biology, 276 (2), pp. 319-24. ISSN 0022-2836,
[Article]

This list was generated on Sun Aug 1 01:26:11 2021 CEST.