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Number of items: 10.

de Heras Ciechomski, P. and Klann, M. and Mange, R. and Koeppl, H. (2013):
From biochemical reaction networks to 3D dynamics in the cell: The ZigCell3D modeling, simulation and visualisation framework.
In: IEEE Symposium on Biological Data Visualization (BioVis), IEEE, pp. 41-48, [Online-Edition: http://ieeexplore.ieee.org/lpdocs/epic03/wrapper.htm?arnumbe...],
[Article]

Klann, M. and Koeppl, H. (2013):
Reaction schemes, escape times and geminate recombinations in particle-based spatial simulations of biochemical reactions.
In: Physical biology, pp. 046005, 10, (4), [Online-Edition: http://iopscience.iop.org/1478-3975/10/4/046005/article],
[Article]

Klann, M. and Paulevé, L. and Petrov, T. and Koeppl, H. (2013):
Coarse-Grained Brownian Dynamics Simulation of Rule-Based Models.
Springer Berlin Heidelberg, In: 11th International Conference on Computational Methods in Systems Biology (CMSB 2013), 8130, [Online-Edition: http://link.springer.com/chapter/10.1007/978-3-642-40708-6_6...],
[Conference or Workshop Item]

Klann, M. and Ganguly, A. and Koeppl, H. (2012):
Hybrid spatial Gillespie and particle tracking simulation.
In: Bioinformatics (Oxford, England), pp. i549, 28, (18), [Online-Edition: http://bioinformatics.oxfordjournals.org/content/28/18/i549....],
[Article]

Hiroi, N. and Klann, M. and Iba, K. and de Heras Ciechomski, P. and Yamashita, S. and Tabira, A. and Okuhara, T. and Kubojima, T. and Okada, Y. and Oka, K. and Mange, R. and Unger, M. and Funahashi, A. and Koeppl, H. (2012):
From microscopy data to in silico environments for in vivo-oriented simulations.
In: EURASIP Journal on Bioinformatics and Systems Biology, p. 7, 2012, (1), [Online-Edition: http://bsb.eurasipjournals.com/CONTENT/2012/1/7],
[Article]

Klann, M. and Koeppl, H. and Reuss, M. (2012):
Spatial modeling of vesicle transport and the cytoskeleton: the challenge of hitting the right road.
In: PloS one, pp. e29645, 7, (1), [Online-Edition: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjourna...],
[Article]

Klann, M. and Koeppl, H. (2012):
Spatial simulations in systems biology: from molecules to cells.
In: International journal of molecular sciences, pp. 7798-7827, 13, (6), [Online-Edition: http://www.mdpi.com/1422-0067/13/6/7798],
[Article]

Klann, M. and Koeppl, H. (2012):
Spatial stochastic simulation of transcription factor binding reveals mechaniscms to control gene activation.
Tampere University of Technology, Tampere International Center for Signal Processing, In: 9th International Workshop on Computational Systems Biology (WCSB 2012), 61, [Online-Edition: http://www.cs.tut.fi/wcsb12/WCSB2012.pdf],
[Conference or Workshop Item]

Klann, M. and Ganguly, A. and Koeppl, H. (2011):
Improved Reaction Scheme for Spatial Stochastic Simulations with Single Molecule Detail.
Tampere, Tampere University of Technology, In: Eighth International Workshop on Computational Systems Biology (WCSB 2011), 57, [Online-Edition: http://www.wcsb2011.ethz.ch/programme],
[Conference or Workshop Item]

Falk, M. and Ott, M. and Ertl, T. and Klann, M. and Koeppl, H. (2011):
Parallelized Agent-based Simulation on CPU and Graphics Hardware for Spatial and Stochastic Models in Biology Categories and Subject Descriptors.
In: CMSB '11 Proceedings of the 9th International Conference on Computational Methods in Systems Biology, New York, New York, USA, ACM Press, [Online-Edition: http://dl.acm.org/citation.cfm?doid=2037509.2037521],
[Conference or Workshop Item]

This list was generated on Tue Jul 16 01:49:21 2019 CEST.